epiphytrainR

About

This is a R shiny app to assist in teaching the principles of plant disease epidemiology. You can find the source code for this app on github, https://github.com/PaulMelloy/epiphytrainR/

Choose weather location

Global weather data is sourced from the NASA POWER project via the R API client nasapower

Acknowledgements

This app is developed by Dr Paul Melloy from The University of Queensland using packages such as: epicrop developed by Prof. Adam Sparks



Activity

Help us create a epidemiological model to simulate Net-blotch severity and yield loss in Barley. Do some research online and add to the following google sheets document:

Net-blotch in barley epidemiological colaborative






Session info


Epicrop is a package for predicting the intensity of rice diseases using weather data.

Weather plot

Disease progress

SEIR is a disease model which simulates Susceptible, Exposed, Infectious and Removed plant sites during a plant disease epidemic.

Weather plot

Disease progress